insitupy.dataclasses.MultiCellData

insitupy.dataclasses.MultiCellData#

class insitupy.dataclasses.MultiCellData#

Data object containing multiple CellData objects.

__init__()#

Methods

__init__()

add_baysor(xd, path[, counts_file, ...])

add_celldata(cd, key[, is_main, overwrite])

add_proseg(path[, counts_file, ...])

Adds output of Proseg dcjones/proseg segmentation to the object.

close()

Close underlying resources owned by all contained CellData layers.

copy()

Function to generate a deep copy of the current object.

crop([xlim, ylim, shape, inplace, verbose])

keys()

save(path[, boundaries_zipped, overwrite, ...])

set_main(key)

sync()

Attributes

boundaries

is_empty

layers

main_key

matrix

table

Alias for matrix property.