insitupy.dataclasses.CellData

class insitupy.dataclasses.CellData(table, boundaries, config={})

Data object containing an AnnData object and a boundary object which are kept in sync.

__init__(table, boundaries, config={})

Methods

__init__(table, boundaries[, config])
close()	Close underlying resources owned by this CellData object.
copy()	Function to generate a deep copy of the current object.
crop([xlim, ylim, shape, inplace, verbose])
save(path[, boundaries_zipped, ...])
set_table(value[, allow_partial_overlap])	Safely set table data while keeping table and boundaries consistent.
shift(x, y)	Function to shift the coordinates of both table and boundaries data by certain values x/y.
sync([verbose])	Function to synchronize table and boundaries of CellData.

Attributes

boundaries
config
entries
matrix
table	Alias for matrix property.