insitupy.dataclasses.ImageData

insitupy.dataclasses.ImageData#

class insitupy.dataclasses.ImageData(img_files=None, img_names=None, pixel_size=None)#

Object to read and load images.

__init__(img_files=None, img_names=None, pixel_size=None)#

Methods

__init__([img_files, img_names, pixel_size])

add_image(image[, channel_names, axes, ...])

Add image data to the ImageData object.

copy()

Function to generate a deep copy of the current object.

crop(xlim, ylim[, inplace])

keys()

load([which])

Load images into memory.

remove_image(names[, verbose])

Remove one or more images from the ImageData object.

save(output_folder[, keys_to_save, as_zarr, ...])

Save images to the specified output folder in either Zarr or OME-TIFF format.

transform(transformation_matrix[, ...])

Apply an affine transformation to all images in the ImageData object.

Attributes

is_empty

metadata

names