insitupy.CellData#
- class insitupy.CellData(matrix, boundaries, config={})#
Data object containing an AnnData object and a boundary object which are kept in sync.
- __init__(matrix, boundaries, config={})#
Methods
__init__(matrix, boundaries[, config])copy()Function to generate a deep copy of the current object.
crop([xlim, ylim, shape, inplace, verbose])save(path[, boundaries_zipped, ...])shift(x, y)Function to shift the coordinates of both matrix and boundaries data by certain values x/y.
sync([verbose])Function to synchronize matrix and boundaries of CellData.
Attributes
boundariesconfigentriesmatrix