Data import

These tutorials explain how to import data from different technologies and tools into InSituPy.

Build an InSituData object from custom data

Tutorial on how to generate an InSituData object from scratch.

Build an InSituData object from custom data

Read data from QuPath

Tutorial showing how to export data from QuPath and read it with read_qupath_project or read_qupath.

Addition of data segmented with proseg

Perform segmentation with Proseg and add the results to InSituData

Tutorial on how to improve cell segmentation with Proseg and add the data to InSituData for downstream analysis.

Reading data from QuPath projects