Index _ | A | B | C | F | G | I | L | M | O | P | Q | R | S | T | V _ __init__() (insitupy.dataclasses.AnnotationsData method) (insitupy.dataclasses.BoundariesData method) (insitupy.dataclasses.CellData method) (insitupy.dataclasses.ImageData method) (insitupy.dataclasses.MultiCellData method) (insitupy.dataclasses.RegionsData method) (insitupy.dataclasses.ShapesData method) (insitupy.InSituData method) (insitupy.InSituExperiment method) A annotations (insitupy.InSituData attribute) AnnotationsData (class in insitupy.dataclasses) assign_annotations() (insitupy.InSituData method) assign_geometries() (insitupy.InSituData method) assign_regions() (insitupy.InSituData method) B BoundariesData (class in insitupy.dataclasses) C cell_abundance_along_axis() (in module insitupy.plotting) cell_expression_along_axis() (in module insitupy.plotting) CellData (class in insitupy.dataclasses) cells (insitupy.InSituData attribute) cellular_composition() (in module insitupy.plotting) colorlegend() (in module insitupy.plotting) concat() (insitupy.InSituExperiment class method) copy() (insitupy.InSituData method) crop() (insitupy.InSituData method) F from_config() (insitupy.InSituExperiment class method) from_insitudata (insitupy.InSituData attribute) from_regions() (insitupy.InSituExperiment class method) G get_loaded_modalities() (insitupy.InSituData method) I ImageData (class in insitupy.dataclasses) images (insitupy.InSituData attribute) import_annotations() (insitupy.InSituData method) import_regions() (insitupy.InSituData method) InSituData (class in insitupy) InSituExperiment (class in insitupy) insitupy._core module, [1] insitupy.dataclasses module, [1], [2], [3] insitupy.experiment module, [1], [2], [3] insitupy.io module, [1] insitupy.plotting module L list_quicksaves() (insitupy.InSituData method) load_all() (insitupy.InSituData method) load_annotations() (insitupy.InSituData method) load_cells() (insitupy.InSituData method) load_images() (insitupy.InSituData method) load_quicksave() (insitupy.InSituData method) load_regions() (insitupy.InSituData method) load_transcripts() (insitupy.InSituData method) M metadata (insitupy.InSituData attribute) module insitupy._core, [1] insitupy.dataclasses, [1], [2], [3] insitupy.experiment, [1], [2], [3] insitupy.io, [1] insitupy.plotting MultiCellData (class in insitupy.dataclasses) O overview() (in module insitupy.plotting) P path (insitupy.InSituData attribute) plot_dimred() (insitupy.InSituData method) Q quicksave() (insitupy.InSituData method) quicksave_dir (insitupy.InSituData attribute) R read() (insitupy.InSituData class method) (insitupy.InSituData method) (insitupy.InSituExperiment class method) read_celldata() (in module insitupy.dataclasses) read_multicelldata() (in module insitupy.dataclasses) read_qupath() (in module insitupy.io) read_qupath_project() (in module insitupy.io) read_shapesdata() (in module insitupy.dataclasses) read_xenium() (in module insitupy.io) regions (insitupy.InSituData attribute) RegionsData (class in insitupy.dataclasses) reload() (insitupy.InSituData method) remove_history() (insitupy.InSituData method) remove_modality() (insitupy.InSituData method) S sample_id (insitupy.InSituData attribute) save() (insitupy.InSituData method) save_colorlegends() (insitupy.InSituData method) saveas() (insitupy.InSituData method) ShapesData (class in insitupy.dataclasses) show() (insitupy.InSituData method) slide_id (insitupy.InSituData attribute) spatial() (in module insitupy.plotting) store_geometries() (insitupy.InSituData method) T transcripts (insitupy.InSituData attribute) V viewer (insitupy.InSituData attribute) volcano() (in module insitupy.plotting)
