insitupy.InSituExperiment
=========================

.. currentmodule:: insitupy

.. autoclass:: InSituExperiment

   
   .. automethod:: __init__

   
   .. rubric:: Methods

   .. autosummary::
   
      ~InSituExperiment.__init__
      ~InSituExperiment.add
      ~InSituExperiment.append_metadata
      ~InSituExperiment.collect_anndatas
      ~InSituExperiment.concat
      ~InSituExperiment.copy
      ~InSituExperiment.create_color_dict
      ~InSituExperiment.dge
      ~InSituExperiment.from_config
      ~InSituExperiment.from_regions
      ~InSituExperiment.get_n_cells
      ~InSituExperiment.import_obs
      ~InSituExperiment.iterdata
      ~InSituExperiment.load_all
      ~InSituExperiment.load_annotations
      ~InSituExperiment.load_cells
      ~InSituExperiment.load_images
      ~InSituExperiment.load_regions
      ~InSituExperiment.load_transcripts
      ~InSituExperiment.plot_embedding
      ~InSituExperiment.plot_overview
      ~InSituExperiment.plot_umaps
      ~InSituExperiment.query
      ~InSituExperiment.read
      ~InSituExperiment.remove_history
      ~InSituExperiment.save
      ~InSituExperiment.saveas
      ~InSituExperiment.show
      ~InSituExperiment.show_modality
      ~InSituExperiment.sync_colors
   
   

   
   
   .. rubric:: Attributes

   .. autosummary::
   
      ~InSituExperiment.annotations
      ~InSituExperiment.cells
      ~InSituExperiment.colors
      ~InSituExperiment.data
      ~InSituExperiment.images
      ~InSituExperiment.metadata
      ~InSituExperiment.path
      ~InSituExperiment.regions
      ~InSituExperiment.transcripts